PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR72180.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 122aa MW: 14107 Da PI: 9.5385 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 77.6 | 2.9e-24 | 12 | 122 | 2 | 120 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 p G+rF+Ptd+el+ +yL++k+++ +l++ ++ikev++yk++P++L +++ + +e+++yfF+++ +ky +r+tk+g+ ka + e+++ ++++ RWR72180.1 12 PFGYRFRPTDKELL-KYLQRKTDNLPLSC-DIIKEVELYKFDPSELLAQFGSrGEDKCYFFTSTYQKY------RRSTKNGFGKARTGESEIKE-GNNV 101 89************.9*************.99**************866655255699*****99988......68999*****99999****9.999* PP NAM 100 vglkktLvfykgrapkgektd 120 +g+ +Lvfy g++p+ +kt+ RWR72180.1 102 IGTTISLVFYYGEHPREKKTN 122 ******************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence |
MSCGASTSMR VPFGYRFRPT DKELLKYLQR KTDNLPLSCD IIKEVELYKF DPSELLAQFG 60 SRGEDKCYFF TSTYQKYRRS TKNGFGKART GESEIKEGNN VIGTTISLVF YYGEHPREKK 120 TN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27300.1 | 3e-22 | NAC family protein |