PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72148.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family HSF
Protein Properties Length: 199aa    MW: 22933.9 Da    PI: 8.3793
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72148.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind106.71.8e-33301202101
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y+++e +  ++++sw+++g+ f+v+ + ef++ +Lp+yFkh nf+SF+RQLn+YgFkk+ +++         weF+h++F+kg+++ll +i 
    RWR72148.1  30 FLTKTYDLIEGSGANHIVSWNDEGSGFIVWSPVEFSQFLLPRYFKHCNFSSFIRQLNTYGFKKSASNR---------WEFQHEKFRKGERHLLGEIT 117
                   9**************************************************************99988.........******************** PP

                   XXX CS
  HSF_DNA-bind  99 rkk 101
                   r+k
    RWR72148.1 118 RRK 120
                   *97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MKMEKGGADP DRCSQSSSSH SPRSRCLAPF LTKTYDLIEG SGANHIVSWN DEGSGFIVWS  60
PVEFSQFLLP RYFKHCNFSS FIRQLNTYGF KKSASNRWEF QHEKFRKGER HLLGEITRRK  120
CLPSVYPSFL KACERRPEAE AIDIDSLVEE NKNLQKENSE LQLQIAHFKA LEVELLDWLS  180
HYMGGTSSNH QGQRVCRSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.12e-41HSF family protein