PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR72148.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | HSF | ||||||||
Protein Properties | Length: 199aa MW: 22933.9 Da PI: 8.3793 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 106.7 | 1.8e-33 | 30 | 120 | 2 | 101 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y+++e + ++++sw+++g+ f+v+ + ef++ +Lp+yFkh nf+SF+RQLn+YgFkk+ +++ weF+h++F+kg+++ll +i RWR72148.1 30 FLTKTYDLIEGSGANHIVSWNDEGSGFIVWSPVEFSQFLLPRYFKHCNFSSFIRQLNTYGFKKSASNR---------WEFQHEKFRKGERHLLGEIT 117 9**************************************************************99988.........******************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k RWR72148.1 118 RRK 120 *97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MKMEKGGADP DRCSQSSSSH SPRSRCLAPF LTKTYDLIEG SGANHIVSWN DEGSGFIVWS 60 PVEFSQFLLP RYFKHCNFSS FIRQLNTYGF KKSASNRWEF QHEKFRKGER HLLGEITRRK 120 CLPSVYPSFL KACERRPEAE AIDIDSLVEE NKNLQKENSE LQLQIAHFKA LEVELLDWLS 180 HYMGGTSSNH QGQRVCRSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62020.1 | 2e-41 | HSF family protein |