PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007769.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 502aa MW: 55386.3 Da PI: 6.827

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007769.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.4	5.3e-32	156	213	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d+++++i+Y+g+H+h+k XP_023007769.1 156 DDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITDIVYKGTHDHPK 213 8**************************************.*************85 PP
2	WRKY	105.5	2.8e-33	328	386	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct gCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_023007769.1 328 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHD 386 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MLSSVEPSPT TGSFTKLPMA RDSSSLAIYP MTTMACSNAN ASDEGNSNYF EFKPYVGPNM 60 VPADMSHRKD EQSCELQVQG QPQPFTAPPM TKSEINVISN DSSRSTQMDP VASGAAVPDV 120 DGDDFNHSLN TNTRAQAAQS DPKGSGSPVV SDRISDDGYN WRKYGQKQVK GSEFPRSYYK 180 CTHPNCEVKK LFERSHDGQI TDIVYKGTHD HPKLQPSRRY SAGASVKDGP DKPSPLTGQD 240 DRSCSIYTQT VHSIEPNGTP ERLAANDSNT EGAGTTLPCK NPDELDDDDI IMKRRKMELG 300 GFEACPAMVR PIREPRVVVQ TLSEVDILDD GYRWRKYGQK VVRGNPNPRS YYKCTNVGCP 360 VRKHVERASH DPKAVITTYE GKHNHDVPTA KTSSHDAAGP LRTAPLRYRL EDRDTVSLDL 420 GVGIGENRSN EYRQQALAPN GNFNFEVVQE NSAPTYFSVH NRGMNQHGPR ESLSESRSME 480 VVPLNHSSHP YPPSIGRILT GP

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MLSSVEPSPT TGSFTKLPMA RDSSSLAIYP MTTMACSNAN ASDEGNSNYF EFKPYVGPNM  60
VPADMSHRKD EQSCELQVQG QPQPFTAPPM TKSEINVISN DSSRSTQMDP VASGAAVPDV  120
DGDDFNHSLN TNTRAQAAQS DPKGSGSPVV SDRISDDGYN WRKYGQKQVK GSEFPRSYYK  180
CTHPNCEVKK LFERSHDGQI TDIVYKGTHD HPKLQPSRRY SAGASVKDGP DKPSPLTGQD  240
DRSCSIYTQT VHSIEPNGTP ERLAANDSNT EGAGTTLPCK NPDELDDDDI IMKRRKMELG  300
GFEACPAMVR PIREPRVVVQ TLSEVDILDD GYRWRKYGQK VVRGNPNPRS YYKCTNVGCP  360
VRKHVERASH DPKAVITTYE GKHNHDVPTA KTSSHDAAGP LRTAPLRYRL EDRDTVSLDL  420
GVGIGENRSN EYRQQALAPN GNFNFEVVQE NSAPTYFSVH NRGMNQHGPR ESLSESRSME  480
VVPLNHSSHP YPPSIGRILT GP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	1e-149	WRKY family protein