PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007517.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 285aa MW: 32579.8 Da PI: 5.5736

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007517.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60	5.3e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lvd+++++G g+W++ ++ g++R++k+c++rw +yl XP_023007517.1 14 KGPWTPEEDKKLVDYIEKHGYGSWRSLPNLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	51.1	3e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++++++++ lG++ W+ Iar+++ gRt++++k++w+++l XP_023007517.1 67 RGNFSDQEEQIIINLHGVLGNK-WSIIARHLP-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MMLRSPTLEN GVKKGPWTPE EDKKLVDYIE KHGYGSWRSL PNLAGLNRCG KSCRLRWTNY 60 LRPDIIRGNF SDQEEQIIIN LHGVLGNKWS IIARHLPGRT DNEIKNFWNT HLKKKLLQMG 120 IDPITHMPRT NPYLNNLSNL HHLLSFSTAP WDNPLGLHSE ITQLAKAQLL QNLWQLPIPS 180 SPFLYNSLFN GQQISSLQTL PISVEPSEKP LSCEDCDGAM DDTLGFRNDS NQSETPYDMS 240 QSSSSLMNLI PTSLECLKIP TVVEDEWEDL INDEESNSYW KHVVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02940.1	1e-77	MYB family protein