PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007343.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 492aa MW: 53589.1 Da PI: 6.8312

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007343.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.6	5.5e-17	156	205	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_023007343.1 156 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHSAARAYDRAAIKFRG 205 78*****************......55**********************997 PP
2	AP2	40.9	5e-13	248	298	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ g +k+++lg f+++ eAa+a+++a+ k +g XP_023007343.1 248 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDKAAIKCNG 298 89******.7**...5...334336******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MFDLNLNVDS VDATHKEDSV VFFEKLPQGS GNHVDESGTS NSSIVNADTS SNGGDDDSCS 60 TRAGGELFTL NFEILKAGST NDMVTKEFFP LGGAVNAEFG IPQGHKSASS SSSSSRKNWI 120 DLACNRSSSA GEGRTVQPVQ PQPVKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ 180 VYLGGFDTAH SAARAYDRAA IKFRGVDADI NFNVSDYEED LKLMENLSKE EFVHILRRQS 240 TGFSRGSSKY RGVTLHKCGR WEARMGQLLG KKYIYLGLFD SEVEAARAYD KAAIKCNGRE 300 AVTNFEPSTY EGEGVSEGSS EGGRSMLDLN LGISPPSNCP NEDDGHLRFQ SGPCFPNDRS 360 TKMESNARAA VGDPPVNGLA MTSEHAPLWN GTQSSFFPSE ESMTEKRLAL GSSQGVPNWA 420 WQIHGPINAA QMPLFSTAAS SGFSFSATHF PAAMPPPHQP SSIAQNIHFN SAKASLNPPQ 480 YHHLLNQQHA PP

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MFDLNLNVDS VDATHKEDSV VFFEKLPQGS GNHVDESGTS NSSIVNADTS SNGGDDDSCS  60
TRAGGELFTL NFEILKAGST NDMVTKEFFP LGGAVNAEFG IPQGHKSASS SSSSSRKNWI  120
DLACNRSSSA GEGRTVQPVQ PQPVKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ  180
VYLGGFDTAH SAARAYDRAA IKFRGVDADI NFNVSDYEED LKLMENLSKE EFVHILRRQS  240
TGFSRGSSKY RGVTLHKCGR WEARMGQLLG KKYIYLGLFD SEVEAARAYD KAAIKCNGRE  300
AVTNFEPSTY EGEGVSEGSS EGGRSMLDLN LGISPPSNCP NEDDGHLRFQ SGPCFPNDRS  360
TKMESNARAA VGDPPVNGLA MTSEHAPLWN GTQSSFFPSE ESMTEKRLAL GSSQGVPNWA  420
WQIHGPINAA QMPLFSTAAS SGFSFSATHF PAAMPPPHQP SSIAQNIHFN SAKASLNPPQ  480
YHHLLNQQHA PP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-126	AP2 family protein