PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023007251.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 177aa    MW: 20436 Da    PI: 5.4134
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023007251.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.12e-24121371128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lppG+rF Ptde+lv ++L +k++  +  ++ +++i++++++ ++Pw+++ ++ ++ +  yfFs+  +        ++at++gyWk    d+++l
  XP_023007251.1  12 LPPGLRFCPTDEDLVLHFLYHKASLASphHSSNSIIPQLQLHLYNPWQFHGRALSNGDIHYFFSTVGE--------SKATENGYWKDVLMDEPIL 98 
                     79********************8877754555567**************9665565666788888765........46799*************9 PP

             NAM  94 sk.kgelvglkktLvfy..kg.rapkgektdWvmheyrl 128
                     ++ +g +vg+kk  +f+  +g ++p++ +t+Wvm+eyr+
  XP_023007251.1  99 CSaTGDEVGIKKYHIFFvgEGdDSPTPIQTTWVMQEYRI 137
                     9878889*********966444789999*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MEASSENRFN LLPPGLRFCP TDEDLVLHFL YHKASLASPH HSSNSIIPQL QLHLYNPWQF  60
HGRALSNGDI HYFFSTVGES KATENGYWKD VLMDEPILCS ATGDEVGIKK YHIFFVGEGD  120
DSPTPIQTTW VMQEYRIYSY LLDTHVHTPD TLPKQESVIF VFDVAYIDFY FSHRYLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.19e-36NAC family protein