PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023007250.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 204aa    MW: 23540.2 Da    PI: 4.3737
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023007250.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM77.53e-24121371128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lppG+rF Ptde+lv ++L +k++  +  ++ +++i++++++ ++Pw+++ ++ ++ +  yfFs+  +        ++at++gyWk    d+++l
  XP_023007250.1  12 LPPGLRFCPTDEDLVLHFLYHKASLASphHSSNSIIPQLQLHLYNPWQFHGRALSNGDIHYFFSTVGE--------SKATENGYWKDVLMDEPIL 98 
                     79********************8877754555567**************9665565666788888765........46799*************9 PP

             NAM  94 sk.kgelvglkktLvfy..kg.rapkgektdWvmheyrl 128
                     ++ +g +vg+kk  +f+  +g ++p++ +t+Wvm+eyr+
  XP_023007250.1  99 CSaTGDEVGIKKYHIFFvgEGdDSPTPIQTTWVMQEYRI 137
                     9878889*********966444789999*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MEASSENRFN LLPPGLRFCP TDEDLVLHFL YHKASLASPH HSSNSIIPQL QLHLYNPWQF  60
HGRALSNGDI HYFFSTVGES KATENGYWKD VLMDEPILCS ATGDEVGIKK YHIFFVGEGD  120
DSPTPIQTTW VMQEYRIYSY LLDTHVHTPD TLPKQESEFG LWVMCRVFEA KDNSGRSIFS  180
YEDNEDNESE LSYLDEMYLT LDDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.12e-43NAC family protein