PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023007241.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 309aa    MW: 33732.7 Da    PI: 7.4372
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023007241.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.86.8e-10760347
                     SS-HHHHHHHHHHHHHTTTT..........-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg..........tWktIartmgkgRtlkqcksrwqky 47
                     +WT+eEd+ + +a++ +              W++Ia++++ ++  +++k ++q++
   XP_023007241.1  7 AWTKEEDKAFENAIATHWDApelegkeseeMWEKIASMLP-TKNMEDLKQHYQML 60
                     7****************9779*******************.************86 PP
2Myb_DNA-binding38.92.1e-12145189347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ +  ++G+g+W++I+r +   Rt+ q+ s+ qky
   XP_023007241.1 145 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 189
                      7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MSTGSAAWTK EEDKAFENAI ATHWDAPELE GKESEEMWEK IASMLPTKNM EDLKQHYQML  60
VEDVGAIEAG QVPIPNYASV GEETTNASTK DKDRHLHPHG ATGSDTNKRP NSGFGSGFSG  120
LSHDSSSHAT KGGSRSEQER RKGIPWTEEE HRLFLLGLDK FGKGDWRSIS RNFVISRTPT  180
QVASHAQKYF IRLNSMNRDR RRSSIHDITS VNNGGGDVMA HQAPITGHQT NGMNQNNPPA  240
LGPPGKHRPQ QHLPGIGMYG APVGHPVATP PGHMASAVGT PVMLPHGIHP HPPYVMPVAY  300
PMAPPPMHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.12e-79MYB family protein