PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007168.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 451aa MW: 49611.6 Da PI: 8.7969

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007168.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.4	5.3e-32	172	229	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgse+prsYY+Ct+++Cpv+k+ve+s +++++ei+Y+++Hnh+k XP_023007168.1 172 DDGYNWRKYGQKLVKGSENPRSYYKCTHPTCPVRKQVEKSL-NGQITEIVYKSKHNHPK 229 8**************************************.*************85 PP
2	WRKY	100.5	1e-31	329	387	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy WrKYGqK+vkg+++prsYY+Ct+agC v+k++er+++d k+v +tYeg+Hnhe XP_023007168.1 329 LDDGYWWRKYGQKVVKGNPNPRSYYKCTYAGCGVRKHIERASHDLKAVMTTYEGKHNHE 387 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MVMEFFFSSR VEEDPNDGRP RLPESTAPPI SSKFSSTPTP NPPLLSAMSQ PLFSPSSFFT 60 IPPGISPTQL LDSPVLLTSS NFQASPTTGA ISTGHHQKNM KQEQHNLAEF SFPRTNPTKS 120 SSSSSIMFQS SSMQNQPWVS QAAFNFPPET TMNGGSKSDQ HPPSQPKNRA SDDGYNWRKY 180 GQKLVKGSEN PRSYYKCTHP TCPVRKQVEK SLNGQITEIV YKSKHNHPKP EFPRRSSSAS 240 SSSSSSSSSS WLSQALPQTM AAEPKHSMAS DSIPTPENSS TTIGDDDSDE QDAKRWKSES 300 ENEIISAAGG KTVREQRVVV QTISSVDKLD DGYWWRKYGQ KVVKGNPNPR SYYKCTYAGC 360 GVRKHIERAS HDLKAVMTTY EGKHNHEIPA ARGGGSRPVS NNHGNDNGRA SNGGGHVWPS 420 SEISGGDDAF SNMLWRTKEE TADEIFRSLL D

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MVMEFFFSSR VEEDPNDGRP RLPESTAPPI SSKFSSTPTP NPPLLSAMSQ PLFSPSSFFT  60
IPPGISPTQL LDSPVLLTSS NFQASPTTGA ISTGHHQKNM KQEQHNLAEF SFPRTNPTKS  120
SSSSSIMFQS SSMQNQPWVS QAAFNFPPET TMNGGSKSDQ HPPSQPKNRA SDDGYNWRKY  180
GQKLVKGSEN PRSYYKCTHP TCPVRKQVEK SLNGQITEIV YKSKHNHPKP EFPRRSSSAS  240
SSSSSSSSSS WLSQALPQTM AAEPKHSMAS DSIPTPENSS TTIGDDDSDE QDAKRWKSES  300
ENEIISAAGG KTVREQRVVV QTISSVDKLD DGYWWRKYGQ KVVKGNPNPR SYYKCTYAGC  360
GVRKHIERAS HDLKAVMTTY EGKHNHEIPA ARGGGSRPVS NNHGNDNGRA SNGGGHVWPS  420
SEISGGDDAF SNMLWRTKEE TADEIFRSLL D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	3e-87	WRKY family protein