PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023006921.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 458aa MW: 50401.9 Da PI: 8.4345

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023006921.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48.3	2.5e-15	146	205	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_023006921.1 146 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 205 57*****************666664477446***********************98 PP
2	AP2	47.5	4.6e-15	248	299	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_023006921.1 248 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 299 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MNSSSSSNSS SSSSSSSSSN WLAFSLSNNP NSLSLFHHPN PPDLSIFSPK LEDFLRGAST 60 PPPLPSPYQF SPHQTPLTFC EESEICDSDL KTIAASFLRG SPSQFPEQHL QQHLHAPPPH 120 PLPDTLTNPP PPPPKKSVDT FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR REGQSRKGRQ 180 VYLGGYDKEE KAARAYDLAA LKYWGPTTTT NFPVSDYEKD LENMKNMTRQ EFVASLRRKS 240 SGFSRGASIY RGVTRHHQHG RWQARIGRVA GNKDLYLGTF STQEEAAEAY DIAAIKFRGL 300 NAVTNFDISR YDVKSIASSN LPIGGMSATK SKPTTDSSAS EDRDVHHSPV SSTATLLPSH 360 PNTSTLTFGM PPIKQDPSDQ YWSMFGYNVP PPTSSSSFTM FQQPSNTAST TFPAVADLPP 420 TASPPLPEGG AYEQHQQFAA PIALSRASLF QTPIFGIE

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MNSSSSSNSS SSSSSSSSSN WLAFSLSNNP NSLSLFHHPN PPDLSIFSPK LEDFLRGAST  60
PPPLPSPYQF SPHQTPLTFC EESEICDSDL KTIAASFLRG SPSQFPEQHL QQHLHAPPPH  120
PLPDTLTNPP PPPPKKSVDT FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR REGQSRKGRQ  180
VYLGGYDKEE KAARAYDLAA LKYWGPTTTT NFPVSDYEKD LENMKNMTRQ EFVASLRRKS  240
SGFSRGASIY RGVTRHHQHG RWQARIGRVA GNKDLYLGTF STQEEAAEAY DIAAIKFRGL  300
NAVTNFDISR YDVKSIASSN LPIGGMSATK SKPTTDSSAS EDRDVHHSPV SSTATLLPSH  360
PNTSTLTFGM PPIKQDPSDQ YWSMFGYNVP PPTSSSSFTM FQQPSNTAST TFPAVADLPP  420
TASPPLPEGG AYEQHQQFAA PIALSRASLF QTPIFGIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57390.1	1e-137	AP2 family protein