PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023005846.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 222aa MW: 26874.4 Da PI: 8.9439 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.6 | 1.4e-13 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W + Ed +l v+++G + W++Ia+ g+ R++k+c+ rw++yl XP_023005846.1 14 RGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.3 | 2.3e-15 | 71 | 112 | 5 | 48 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + eE+e++++++k++G++ W++Iar ++ gRt++++k++w+++l XP_023005846.1 71 SIEEEEIILKLHKKWGNK-WSRIARWLP-GRTDNEIKNYWRSHL 112 669***************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MATHSALHTE IQRRGPWLEH EDRQLTMFVN RMGERKWDSI AKASGLERSG KSCRFRWLNY 60 LRPNLKCDRI SIEEEEIILK LHKKWGNKWS RIARWLPGRT DNEIKNYWRS HLRKKFPIHL 120 EACKVKHGKQ DKLSLRHDQN ERDVPSYNHF GLSNLEITSS PYEIRLSNWI SNQLMNEKQE 180 VNHHEVCNSL EFCFYYPNMN YAHRVDQIDH FWDSFTPLWD IE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53200.1 | 1e-43 | MYB family protein |