PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005704.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 770aa MW: 85905.4 Da PI: 6.1394

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005704.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.5	6.1e-08	52	94	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+e + a +q G++ +++I +++ + q++++++ + XP_023005704.1 52 AWTREEEESFFTALRQVGKN-FEKITCHVQ-SKNKDQVRHYYYRL 94 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 770 aa Download sequence
MQIDSILSSN SETHLLSETI IAHVGDQGIA ASTPERVVEP LPAKRPTRQW AAWTREEEES 60 FFTALRQVGK NFEKITCHVQ SKNKDQVRHY YYRLVRRMNK LLAPGLCLDA KNSKDTNAAM 120 LRWWSLLEKY SCKASKLHLK PRRFKIFVEA LEHQLLKDRK KTVRKRPLQG ENCPPPMPNA 180 VSNQSRALGH DGRAVKLVLV DTQNIPKLGH RKTASRRNVN VGINRGNNGG YPTVLKPSRQ 240 RRKSEGGVSS AAYKKWEKAA IAGVSLVADA AEHLERTITN RDVLHDQNTV EEKNSDPAGS 300 PLLLLAPLQP NSLIDVANTK LKLQLFPVDD GTRRALELDK HNPHLELTLS TRKKISSVLE 360 HLSRKWGNSS AAHGALMLFP YSMQKKCLAE CQRWTQDSFE SAGDVYAAIG RPQVFRLRYG 420 WCSNAEHGSP ELQTSVPAYC IQDDHIIDAR DINGRIVDLA SIDDQPVGLN KDEVGTLNDN 480 MSTPTVPNET ERFICGRLDD LPRSSDPTLN ISWDKKDVAD RTFIQRSDDV DDLKLSNETS 540 LSAGEWADSL TNINIGDLLS GVSQDVDPNC IDTPLAEGIQ CLQQIPFSCD SFDAAIAAHI 600 SRQQDKTVSQ PTLASHVSSI WDAEETCDAF SFQKNPVILQ EVPSSSPFSS LQGYKHIART 660 YSMESSHMTE ELLSDSPPED HNQGDPMDEC QSDPQISETK DLNELTDIYW PDSLGPLDLD 720 LPSTNKYHSE DLILGDSLSS LNRLIASSLD AFQNCSFFGF DKKESSTFNS

Sequence ? help Back to Top

Protein Sequence Length: 770 aa Download sequence

MQIDSILSSN SETHLLSETI IAHVGDQGIA ASTPERVVEP LPAKRPTRQW AAWTREEEES  60
FFTALRQVGK NFEKITCHVQ SKNKDQVRHY YYRLVRRMNK LLAPGLCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFVEA LEHQLLKDRK KTVRKRPLQG ENCPPPMPNA  180
VSNQSRALGH DGRAVKLVLV DTQNIPKLGH RKTASRRNVN VGINRGNNGG YPTVLKPSRQ  240
RRKSEGGVSS AAYKKWEKAA IAGVSLVADA AEHLERTITN RDVLHDQNTV EEKNSDPAGS  300
PLLLLAPLQP NSLIDVANTK LKLQLFPVDD GTRRALELDK HNPHLELTLS TRKKISSVLE  360
HLSRKWGNSS AAHGALMLFP YSMQKKCLAE CQRWTQDSFE SAGDVYAAIG RPQVFRLRYG  420
WCSNAEHGSP ELQTSVPAYC IQDDHIIDAR DINGRIVDLA SIDDQPVGLN KDEVGTLNDN  480
MSTPTVPNET ERFICGRLDD LPRSSDPTLN ISWDKKDVAD RTFIQRSDDV DDLKLSNETS  540
LSAGEWADSL TNINIGDLLS GVSQDVDPNC IDTPLAEGIQ CLQQIPFSCD SFDAAIAAHI  600
SRQQDKTVSQ PTLASHVSSI WDAEETCDAF SFQKNPVILQ EVPSSSPFSS LQGYKHIART  660
YSMESSHMTE ELLSDSPPED HNQGDPMDEC QSDPQISETK DLNELTDIYW PDSLGPLDLD  720
LPSTNKYHSE DLILGDSLSS LNRLIASSLD AFQNCSFFGF DKKESSTFNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.3	0.0	MYB_related family protein