PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023005470.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 325aa    MW: 36168.6 Da    PI: 6.885
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023005470.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.41.6e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg WT+eEd +l  ++ q+G+++W++I++  g+ R++k+c++rw +yl
   XP_023005470.1 14 RGQWTPEEDNKLSSYISQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYL 61
                     89********************************************97 PP
2Myb_DNA-binding46.49.1e-1568110246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g ++  E++ +v+++   G++ W++Ia+ ++ gRt++++k++w++
   XP_023005470.1  68 GQFSDMEEQTIVKLHSVVGNR-WSLIAAQLP-GRTDNDVKNHWNT 110
                      789******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MGRIPCCEKE NVKRGQWTPE EDNKLSSYIS QHGTRNWRLI PKNAGLQRCG KSCRLRWTNY  60
LRPDLKHGQF SDMEEQTIVK LHSVVGNRWS LIAAQLPGRT DNDVKNHWNT KLKKKLSGMG  120
IDPVTHKPFS HLMAEIATTL APPQGAHLAE AALGCFKDEM LHLLTKKCVD FQLQQANVPP  180
GSSTGTYNHN NQNEKDGTVE NIKLGLSRAI QQSDLITPYK PWNSTDATTT NLEGTSNCFP  240
ASTSGFQYLS PSFGNEGDVP SWSQSMCTGS TCTAGEQQGQ LHEILEEHRE ELSEGGKERR  300
NGTSIFSSDS VLWDLPCDDL MNPVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56110.11e-116MYB family protein