PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023004960.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 610aa MW: 67976.1 Da PI: 6.1456

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023004960.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	66.6	3.6e-21	477	574	2	96
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ + +ed ++++W+++++y ++ks++y+l+ ++ +Fv+angL+egDf+v++ ++ +++ XP_023004960.1 477 QKVLKQSDVGNLGRIVLPKKEAETHlpELEARDGISIAMEDiGTSKVWNMRYRYwpNNKSRMYLLE-NTGDFVRANGLQEGDFIVIY--SDvKCG 568 79***********************999999****7778*****777777777777.******************..566999 PP ..EEEE CS B3 91 elvvkv 96 +++++ XP_023004960.1 569 KYMIRG 574 888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 610 aa Download sequence
MDQTQIWFPQ NHQNFLSDDD DTLMFYSDFP PLSDFPCMSS SSSSSSSSLT PAPVKATASS 60 PSTSSSSTTS WAILKSDAEE PIEEIRVNDN NNSTSVAAAM SSPPPPAETE FNDVDCTDDM 120 MMMDTFGYMN LLEDSNEFFD PTCIFQNEEQ KDPLEDLQLE SFEEVVMEDL MMMHEEGGNK 180 IDERKQNGVV VEEEEEDMAK VFLEWLRSNK ETVSADDLRN VRIKKATIDS AARRLGGGKE 240 GMKQLLKLVL QWVQTNHLHK RKFKDEANFL GFQAPLPSPP VIGYVPAGGG DAYATSHGFS 300 DHYQLLDSPF GPCFNSFIDN FAAGPPPLPP QPHGFAAGYG GGHQYHPYMG QYFQGQGGGG 360 DTSLVRLDSS ATKEARKKRM ARQRRFSAHH RHGGHQNQHP TQMNTNASDH CTMATTAQPN 420 SANWVYWPSP TGAGAGCPVD SSPVHSVDRL NQNFPLPIPT HRRQGWKSEK NLRFLLQKVL 480 KQSDVGNLGR IVLPKKEAET HLPELEARDG ISIAMEDIGT SKVWNMRYRY WPNNKSRMYL 540 LENTGDFVRA NGLQEGDFIV IYSDVKCGKY MIRGVKVRQL GSKPDSKRPG KLQRKGSTSS 600 PMAVATLKRQ

Sequence ? help Back to Top

Protein Sequence Length: 610 aa Download sequence

MDQTQIWFPQ NHQNFLSDDD DTLMFYSDFP PLSDFPCMSS SSSSSSSSLT PAPVKATASS  60
PSTSSSSTTS WAILKSDAEE PIEEIRVNDN NNSTSVAAAM SSPPPPAETE FNDVDCTDDM  120
MMMDTFGYMN LLEDSNEFFD PTCIFQNEEQ KDPLEDLQLE SFEEVVMEDL MMMHEEGGNK  180
IDERKQNGVV VEEEEEDMAK VFLEWLRSNK ETVSADDLRN VRIKKATIDS AARRLGGGKE  240
GMKQLLKLVL QWVQTNHLHK RKFKDEANFL GFQAPLPSPP VIGYVPAGGG DAYATSHGFS  300
DHYQLLDSPF GPCFNSFIDN FAAGPPPLPP QPHGFAAGYG GGHQYHPYMG QYFQGQGGGG  360
DTSLVRLDSS ATKEARKKRM ARQRRFSAHH RHGGHQNQHP TQMNTNASDH CTMATTAQPN  420
SANWVYWPSP TGAGAGCPVD SSPVHSVDRL NQNFPLPIPT HRRQGWKSEK NLRFLLQKVL  480
KQSDVGNLGR IVLPKKEAET HLPELEARDG ISIAMEDIGT SKVWNMRYRY WPNNKSRMYL  540
LENTGDFVRA NGLQEGDFIV IYSDVKCGKY MIRGVKVRQL GSKPDSKRPG KLQRKGSTSS  600
PMAVATLKRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	4e-92	B3 family protein