PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023004363.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 237aa MW: 27743.4 Da PI: 4.999

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023004363.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.8	9.3e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+++Ed++l++ ++q G +W++ +++ g+ R++k+c++rw +yl XP_023004363.1 14 RGPWSPQEDQILIKFIQQNGHSNWRKLPKRAGLLRCGKSCRLRWINYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	47.1	5.4e-15	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +T eE+e ++ ++++lG++ W+ Ia++++ gRt++++k+ w++ XP_023004363.1 67 RGDFTREEEETIITLHQLLGNR-WSMIAAKLP-GRTDNEIKNVWHT 110 899*****************.*****.*********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MGRAPCCEKV GLKRGPWSPQ EDQILIKFIQ QNGHSNWRKL PKRAGLLRCG KSCRLRWINY 60 LRPDLKRGDF TREEEETIIT LHQLLGNRWS MIAAKLPGRT DNEIKNVWHT SLKKRLNQNQ 120 TREDHTELNK NDIPFRDQLP CSLDIKLDGE ENVDRCTKNN DDDNDTRLEE LAFTKDFLEN 180 LFSEEEICPN NCDMIKNDDK SPKEVEISSD TVDIMDFWKG IFMNDGELPE LQEINII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	3e-73	MYB family protein