PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023004309.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 254aa MW: 29053 Da PI: 9.655 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 159.3 | 1.5e-49 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelv +yL++kv + +l++ ++i++vd+ k++PwdLp + e+e yfFs+r+ ky++g+r+nra++sgyWkatg dk++l++ XP_023004309.1 14 LPPGFRFHPTDEELVLQYLNRKVLSCPLPA-SIIPDVDLRKADPWDLPGN---MEQERYFFSTREAKYPHGNRSNRAAASGYWKATGIDKQILAS 104 79****************************.89***************54...46799**********************************998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++vglkktLvfy+g+ p+g++tdW+mheyrl XP_023004309.1 105 kANQVVGLKKTLVFYRGKPPHGSRTDWIMHEYRL 138 57778***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MEKLNFIKNG VLRLPPGFRF HPTDEELVLQ YLNRKVLSCP LPASIIPDVD LRKADPWDLP 60 GNMEQERYFF STREAKYPHG NRSNRAAASG YWKATGIDKQ ILASKANQVV GLKKTLVFYR 120 GKPPHGSRTD WIMHEYRLAS PPMVCFNASQ EKTTLQSCVA PMENWVLCRI FLKKRNGQQS 180 EEEKDAISNR KARRIGKPVF YEFMRKERGE TDLNLAPSSS SSGSSGLTEI SNNELDDHEE 240 SSSCNTFPYF RRKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 1e-102 | NAC family protein |