PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023004040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C3H | ||||||||
Protein Properties | Length: 743aa MW: 81862 Da PI: 6.8861 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 22.1 | 2.7e-07 | 194 | 214 | 4 | 25 |
---SGGGGTS--TTTTT-SS-S CS zf-CCCH 4 elCrffartGtCkyGdrCkFaH 25 ++C+f+a+ G+C G++C+F H XP_023004040.1 194 AICDFYAK-GWCIKGSSCSFLH 214 68******.************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 743 aa Download sequence |
MDAKRHDKHL RSDTITTTEN SEVNKLSSVG ETESNGNIEF ARLSGEPLAK LVEQSHGECK 60 KVESRKCPKD KETEDQELTV DDKDVEALRN NLPKDSGGSI YNSKVPLCNR GIINAKVSNG 120 LSVTVEDSDI GLENHLVGGN IGSTNPEKES TQTDMQLENG KNQMASRSAA SKKRTRKLSP 180 GADVNIEQKR PAAAICDFYA KGWCIKGSSC SFLHIKDNAH GSDQHSEEHA GAVYLKKQVQ 240 PNQAGLQYSA DASKSPVFHH PPNSSFLKDS SLSLKFGISS ERTLPRDFTE SKGWDVLHEK 300 NKFLLHQRED PLLREHPDCQ KLPSTSFDVS FPLNREGSTA RNDQPPEFGP SSGGFAKLSV 360 MEEPANVACP HLLNDYHSPV LRSSLNSNTT LTKGGILSSR FTTSNDSFPF TPSSSASFFG 420 AQKMFIIDGE HRVSMPASSF TRSSPFSPSE SDNSLINASM NSSDYKTKYS CDDWEPSEPF 480 RPSFFIPSIN TASQYDPFLD SIELPRKVGG CHNVSLDHQG REEVSPLSTL HRASGNYMVP 540 GSSKPEFNDD TSSLSSHNKA EDKNEKAGHV QGTDSLMLEA EIQGSSGIDG CNGSRTREDD 600 HMGLIREKNV PKKMKTDTDG KINLSNIALH EKESEAESDR QLGDMDGKHL IDGNVHKESK 660 ATRHFRSALI ELVKGILRPK WREGHLKKDV HNTVVKKTLD KVLGTLQPFQ VPTTVESVKQ 720 YLSSSRPKIE KLVEGYVSKY GKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33835.1 | 1e-32 | C3H family protein |