PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003919.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SRS

Protein Properties

Length: 286aa MW: 31221.3 Da PI: 7.5007

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003919.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	102.9	5.4e-32	94	158	3	67
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa 67 g++sCqdCGnqak+dC+h+RCR CC++rgf C+thvkstWvpaakrr+rqq+laa++++ ++++ XP_023003919.1 94 GGGISCQDCGNQAKRDCTHMRCRSCCNTRGFPCQTHVKSTWVPAAKRRQRQQKLAALQTHPKRHT 158 5789****************************************************999887765 PP
2	DUF702	88.4	1.6e-27	162	223	92	154
DUF702 92 ssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++ ++++ le+ ++P+e++s+avfrcvr+ss dd ++++aYqtav+igGhvfkGiLydqG+e+ XP_023003919.1 162 PT-TNTSGLEIGNFPAELNSPAVFRCVRLSSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPEN 223 33.3456889999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MSMSGFFTLG STDQEHQQTD TNRPNQTLPP DTLFWYKPGS VELWQPQQHQ QHQQQSLFQT 60 RSHNNNNNNN NNLYSDESSS RSGNLMMISS GSGGGGISCQ DCGNQAKRDC THMRCRSCCN 120 TRGFPCQTHV KSTWVPAAKR RQRQQKLAAL QTHPKRHTDN IPTTNTSGLE IGNFPAELNS 180 PAVFRCVRLS STDDTDDQYA YQTAVNIGGH VFKGILYDQG PENNYVPGET SSSGGGGLQP 240 LNFIAGAADA NAASSAALPL LDPSSLYSAP LNSFMAGTQF FLPPRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66350.1	8e-46	SRS family protein