PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023003918.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SRS
Protein Properties Length: 291aa    MW: 31762 Da    PI: 7.5007
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023003918.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702188.42.7e-58942283154
          DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 
                      g++sCqdCGnqak+dC+h+RCR CC++rgf C+thvkstWvpaakrr+rqq+laa++++          kr+ ++     ++ +s      + +
  XP_023003918.1  94 GGGISCQDCGNQAKRDCTHMRCRSCCNTRGFPCQTHVKSTWVPAAKRRQRQQKLAALQTHP---------KRHTDNI---PTTNTS-----VTLN 171
                     5789**************************************************9985544.........4444432...222222.....2335 PP

          DUF702  98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                       le+ ++P+e++s+avfrcvr+ss dd ++++aYqtav+igGhvfkGiLydqG+e+
  XP_023003918.1 172 LGLEIGNFPAELNSPAVFRCVRLSSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPEN 228
                     678999*************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MSMSGFFTLG STDQEHQQTD TNRPNQTLPP DTLFWYKPGS VELWQPQQHQ QHQQQSLFQT  60
RSHNNNNNNN NNLYSDESSS RSGNLMMISS GSGGGGISCQ DCGNQAKRDC THMRCRSCCN  120
TRGFPCQTHV KSTWVPAAKR RQRQQKLAAL QTHPKRHTDN IPTTNTSVTL NLGLEIGNFP  180
AELNSPAVFR CVRLSSTDDT DDQYAYQTAV NIGGHVFKGI LYDQGPENNY VPGETSSSGG  240
GGLQPLNFIA GAADANAASS AALPLLDPSS LYSAPLNSFM AGTQFFLPPR S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66350.12e-45SRS family protein