PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003905.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 362aa MW: 42127.9 Da PI: 4.8956

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003905.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.8	1.4e-55	10	139	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv +yL+kkv+++k++l +vik++d+y++ePwdL++ ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v XP_023003905.1 10 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIKDIDLYRIEPWDLQEkcwIGYEEQNEWYFFSHKDKKYPTGTRTNRATLAGFWKATGRDKAV 103 69**************************.9***********953543344677******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ k++l+g++ktLvfy+grap+g+ktdW+mheyrle XP_023003905.1 104 YD-KNKLIGMRKTLVFYRGRAPNGQKTDWIMHEYRLE 139 .999*****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MMESMELSCV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIKDIDLYRI EPWDLQEKCW 60 IGYEEQNEWY FFSHKDKKYP TGTRTNRATL AGFWKATGRD KAVYDKNKLI GMRKTLVFYR 120 GRAPNGQKTD WIMHEYRLES DENGPPQEEG WVVCRAFKKR ANGQSKTTVE QWDSSYFYDE 180 PSRVCSGIDP LEFMSRQSMP QGLLEHNNMM CKQEIEGENV KLIAYNDPFV QLPQLESPSL 240 PLMKRSSSIS LVSECNEEEE PPTKRRYDDN NNNNNNRSSK VTDWRALDKF VASQLSQEDA 300 FEGEGDSRFG AQNNNYNNNN NHHSADMAIL LMENRGHDEE DLYKGFLSSN PESDFGICIF 360 EK

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MMESMELSCV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIKDIDLYRI EPWDLQEKCW  60
IGYEEQNEWY FFSHKDKKYP TGTRTNRATL AGFWKATGRD KAVYDKNKLI GMRKTLVFYR  120
GRAPNGQKTD WIMHEYRLES DENGPPQEEG WVVCRAFKKR ANGQSKTTVE QWDSSYFYDE  180
PSRVCSGIDP LEFMSRQSMP QGLLEHNNMM CKQEIEGENV KLIAYNDPFV QLPQLESPSL  240
PLMKRSSSIS LVSECNEEEE PPTKRRYDDN NNNNNNRSSK VTDWRALDKF VASQLSQEDA  300
FEGEGDSRFG AQNNNYNNNN NHHSADMAIL LMENRGHDEE DLYKGFLSSN PESDFGICIF  360
EK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-128	NAC family protein