PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023003850.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ARR-B | ||||||||
Protein Properties | Length: 422aa MW: 48215.6 Da PI: 7.2767 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 66.1 | 6e-21 | 201 | 253 | 1 | 54 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 kpr+ Wt+eLHerFv a eqL G+++ +P +il+lm+ + L++e+v+SHLQk+R XP_023003850.1 201 KPRVSWTKELHERFVVAYEQL-GEKERVPNNILKLMNDPRLSRENVASHLQKHR 253 79*******************.99999**************************9 PP | |||||||
2 | Myb_DNA-binding | 38.8 | 2.2e-12 | 203 | 253 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r +WT+e++e++v a +qlG + ++ I + m+ +++++++ s++qk++ XP_023003850.1 203 RVSWTKELHERFVVAYEQLGEKerVPNNILKLMNdPRLSRENVASHLQKHR 253 679**********************************************97 PP | |||||||
3 | Response_reg | 57.6 | 7.1e-20 | 28 | 136 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl +d + + ++ l q+l+k +y +v+++++ +ea++ll++++ +D+i++ + +mdG+++l++ r+ ++p ++v+a+++ e++++ + G XP_023003850.1 28 VLAIDANIVCLKYLVQLLQKCQY-KVTATTETTEAIRLLNDEKesFDIIITNVGRNDMDGFKILETVRQGI-DIPAVMVSANEQLEMVKRGVMEG 120 67788889999************.***************777777**********************9966.*********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a+ +l Kp++ +el++ XP_023003850.1 121 AEAYLLKPVSFQELRN 136 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 422 aa Download sequence |
MEEKDNGSAK ISTPENIQHD QFPIGLKVLA IDANIVCLKY LVQLLQKCQY KVTATTETTE 60 AIRLLNDEKE SFDIIITNVG RNDMDGFKIL ETVRQGIDIP AVMVSANEQL EMVKRGVMEG 120 AEAYLLKPVS FQELRNIWQH VLRRRCRKRP NPNVMEQELE QHKPIISHER ATVIDKEDDA 180 IDKNINIDSN HFDSCSSSKK KPRVSWTKEL HERFVVAYEQ LGEKERVPNN ILKLMNDPRL 240 SRENVASHLQ KHRDMLRKKA TGAGKLVGKK NCYDRNSIKA SKIQNSMNQR NNVSTIDQFQ 300 FSNLGRSSME EVQGSKNYYP VPEFKWFASN NLMSKPCDQY LGFGPSNNMN SKYPQSFGNW 360 PMDNMGEIPE EAGHLGWAFP NNNTNAGQCS QLQLVKGSSH VSLLMDDELG DIFKQFQSEE 420 AF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31920.1 | 7e-57 | ARR-B family protein |