PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003361.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 583aa MW: 67122.6 Da PI: 6.5073

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003361.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.2	8.5e-21	68	159	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GFs+rk++s+ s + g ++kr+fvC+++g++ +kk +++r r++ r+gC+ak+ ++ke ++w v ++++ HnHel XP_023003361.1 68 EYYGNFARNNGFSIRKERSRLSPQLG-VYKRDFVCYRSGFAPAKKKPIGEHHRDRKSVRCGCDAKMYLSKEVcegIAQWFVVQFSNVHNHELL 159 59******************8888.***************************************99867789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 583 aa Download sequence
MTSIPSKNVW IRRQQCPCGD WKCYVSYEGE GEEPCVAAQL VKSERVSSEA MVAPYVGMVF 60 KNDNDAFEYY GNFARNNGFS IRKERSRLSP QLGVYKRDFV CYRSGFAPAK KKPIGEHHRD 120 RKSVRCGCDA KMYLSKEVCE GIAQWFVVQF SNVHNHELLE DDQVRLLPAY RKIHEADQER 180 ILLLSKAGFP IHRIVKVLEL EKGIHGGQLP FLERDVRNFV QNRKKIVQEH DALLNERREI 240 DTMELLEACK ATKESDEEFV YDFTVDSNDK VEHVAWSYGY SVNAYAMFGD VVYFDTTYSS 300 ITYGLLLGVW LGIDNHGRTI FFGCVLLQDE TPRSFAWALQ TFIRFMRGTF PQTILTDLDP 360 GLRDAIRTEL PATKHIIPKW NILSKVSSWF SLHLGSHYAE FKSEFDLLYS VESTEDFDIR 420 WGRMVSMFGL VSDKHIDLLF SFREYWVPSY IRGCLLAQMA TPAYFKSVDS FLKGVFNAQT 480 CLCSFFEKVG ISANFQGHEH QEMQYLQAKT NIPIEEHARS ILTPFAFNAL QHELVLAMQY 540 AASEMADGSY LVRHFKKMDG ECLVMWIAES EQIHCSYGDG KAL

Sequence ? help Back to Top

Protein Sequence Length: 583 aa Download sequence

MTSIPSKNVW IRRQQCPCGD WKCYVSYEGE GEEPCVAAQL VKSERVSSEA MVAPYVGMVF  60
KNDNDAFEYY GNFARNNGFS IRKERSRLSP QLGVYKRDFV CYRSGFAPAK KKPIGEHHRD  120
RKSVRCGCDA KMYLSKEVCE GIAQWFVVQF SNVHNHELLE DDQVRLLPAY RKIHEADQER  180
ILLLSKAGFP IHRIVKVLEL EKGIHGGQLP FLERDVRNFV QNRKKIVQEH DALLNERREI  240
DTMELLEACK ATKESDEEFV YDFTVDSNDK VEHVAWSYGY SVNAYAMFGD VVYFDTTYSS  300
ITYGLLLGVW LGIDNHGRTI FFGCVLLQDE TPRSFAWALQ TFIRFMRGTF PQTILTDLDP  360
GLRDAIRTEL PATKHIIPKW NILSKVSSWF SLHLGSHYAE FKSEFDLLYS VESTEDFDIR  420
WGRMVSMFGL VSDKHIDLLF SFREYWVPSY IRGCLLAQMA TPAYFKSVDS FLKGVFNAQT  480
CLCSFFEKVG ISANFQGHEH QEMQYLQAKT NIPIEEHARS ILTPFAFNAL QHELVLAMQY  540
AASEMADGSY LVRHFKKMDG ECLVMWIAES EQIHCSYGDG KAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein