PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023003058.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 313aa    MW: 35466.3 Da    PI: 10.389
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023003058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3598.6e-1931121199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv++ +d+++++ +++p  f ++  g    +++ t++d +g+sW v+l  +k ++ +++++GW+ Fv+ + Lk gDf+vF++dg  +f++ vk
  XP_023003058.1  31 FFKVFL-PDSGSLH-MSIPPAFQKHLHGT--FPIKATIRDHTGKSWCVTL--EKVDELVYFKNGWQAFVDYHCLKYGDFLVFRYDG--GFTFDVK 117
                     788884.5777777.9******8555655..8999***************..***999*************************987..8888*** PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f k
  XP_023003058.1 118 IFGK 121
                     9987 PP
2B336.58.4e-122243021593
                     -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE..E-SS.SEE..E CS
              B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk..ldgr.sefelv 93 
                      ++l+ + +++ + +k ++   +l+de+g+ W  k+  + +++r v  +GW+ F k ngL+++D + F+  l++   +++l+
  XP_023003058.1 224 KVYLSGRVVRDQN-IKLKP-NTVLRDEEGKLWPAKV-CSISQNRLVVNAGWSAFYKGNGLRVNDKCEFEfvLEKGnLCRQLN 302
                     4666666665553.33344.6789************.4788888*************************4333222445555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MISSFLLQIQ FVILCARIMN PSTETAYSLE FFKVFLPDSG SLHMSIPPAF QKHLHGTFPI  60
KATIRDHTGK SWCVTLEKVD ELVYFKNGWQ AFVDYHCLKY GDFLVFRYDG GFTFDVKIFG  120
KNGCKKAVAA EADNSVPILD STLAIAGKSL PILKVKVEAV DEKEEVKPLI SGKRKRLQVG  180
SGIVHKPRRV PTRGRPGNAP NTVEYVAPKG PSFERTMKHW SHKKVYLSGR VVRDQNIKLK  240
PNTVLRDEEG KLWPAKVCSI SQNRLVVNAG WSAFYKGNGL RVNDKCEFEF VLEKGNLCRQ  300
LNVKVTHRRR SLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.18e-39B3 family protein