PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023002964.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 505aa MW: 54369.8 Da PI: 9.6349

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023002964.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	70	92	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_023002964.1 70 FVCEICNKGFQRDQNLQLHRRGH 92 89*******************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MLSNLLLYVS RIWFISANPP YAGRLGQFLT GFRRTHSLHP GKSCLASQLR HPEAEVIALS 60 PKTLLATNRF VCEICNKGFQ RDQNLQLHRR GHNLPWKLRR RSSKEVKKKV YVCPESSCVH 120 HDPSRALGDL TGIKKHFCRK HGEKKWKCGK CSKKYGVQSD WKAHSKICGT HEYKCDCGTL 180 FNRRDSFITH RAFCDVLAEE RAKALLKPVG NSQTAVGKPN PEPSPPSPPP PSPLQSACEP 240 TTVLAVPSQE LPENPLQCIE EAAGMSGTSR SSSSSSSSSS NGSTRSSRFA GLFASSTTSM 300 SLQPPRPYRD LMQAMACSDR SPDYASSSTI EPISLCLAMN QGPSMFGTAS QYHRPYLPMP 360 HPAMSATALL QKAAQVGAAA SNASLLRGLG LVSSSSAAAQ QEILAWNHQR RVEPDDVSFA 420 AGLGLGLPCD GNSGLKQLTR GNHSMFAPKH TTLDFLGLGM AAGGSPNSGL AALITSIGGS 480 VDVTTTTTRS YGATDISTID MNTNN

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MLSNLLLYVS RIWFISANPP YAGRLGQFLT GFRRTHSLHP GKSCLASQLR HPEAEVIALS  60
PKTLLATNRF VCEICNKGFQ RDQNLQLHRR GHNLPWKLRR RSSKEVKKKV YVCPESSCVH  120
HDPSRALGDL TGIKKHFCRK HGEKKWKCGK CSKKYGVQSD WKAHSKICGT HEYKCDCGTL  180
FNRRDSFITH RAFCDVLAEE RAKALLKPVG NSQTAVGKPN PEPSPPSPPP PSPLQSACEP  240
TTVLAVPSQE LPENPLQCIE EAAGMSGTSR SSSSSSSSSS NGSTRSSRFA GLFASSTTSM  300
SLQPPRPYRD LMQAMACSDR SPDYASSSTI EPISLCLAMN QGPSMFGTAS QYHRPYLPMP  360
HPAMSATALL QKAAQVGAAA SNASLLRGLG LVSSSSAAAQ QEILAWNHQR RVEPDDVSFA  420
AGLGLGLPCD GNSGLKQLTR GNHSMFAPKH TTLDFLGLGM AAGGSPNSGL AALITSIGGS  480
VDVTTTTTRS YGATDISTID MNTNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	5e-99	C2H2 family protein