PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023002963.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 505aa MW: 53503.2 Da PI: 8.326 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.2 | 1.4e-05 | 56 | 78 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_023002963.1 56 FVCEICNKGFQRDQNLQLHRRGH 78 89*******************88 PP | |||||||
2 | zf-C2H2 | 11.2 | 0.0012 | 132 | 154 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_023002963.1 132 WKCDKCSKKYAVQSDWKAHSKIC 154 58*****************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 505 aa Download sequence |
MSADVEDSSI ASIEGSVSSP GAKSATKKKR NLPGMPDPEA EVIALSPKTL LATNRFVCEI 60 CNKGFQRDQN LQLHRRGHNL PWKLRQRSSK EVKKKVYVCP ESSCVHHDPS RALGDLTGIK 120 KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH SKICGTREYK CDCGTLFNRR DSFITHRAFC 180 DALAEERAKA QLKPVDEPDL DPDIGDSQTT VAKPNPEPSP LSPPPPSPQS TGEPTTVLPV 240 PNQELPEIPL QYIEEAPGMA ATSGSSSSSS KSASSNSSTR SSGFAGLFAS STTSISLQPP 300 RPPFTNLMQA MACSDRSSDY APSSTIEPIS LCLAMNQGPP MFGTASQDLR PYVPMPHPAM 360 SATALLQRAA QMGAAASSAS LLRGLGLVSS SSSAAQQESL PWNHQRQVEP DGVSIAAGLG 420 LGLPCDGNSG LKELIRGNHS MFAPKHTTLD FLGLGMAAGG SPNSGLAALI TSVGSSVDVT 480 TTAQSYPGGG SGGDISGRQD MNRSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66730.1 | 1e-129 | C2H2 family protein |