PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023002604.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 302aa MW: 34421.5 Da PI: 8.6096

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023002604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3.1e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W+teEd +l+ +++q+G+g +W + ++++g++R++k+c++rw++yl XP_023002604.1 14 KGPWSTEEDTKLKSYIEQHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	36.7	9.4e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_023002604.1 69 GGFSEEEDRIICSLYLSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MGRAPCCDKA SVKKGPWSTE EDTKLKSYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDRIIC SLYLSIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLFGK 120 QRKEQQQQQQ ASRRGNALRH HGTVNKSNST IPYWPQQQQQ LPVAPSYYNN NNNMASSDHI 180 NPIEKLSKFG AQFMDESVYN NNANGYGNAY YFPLLQGQSS TQMVDLENYD MGFDDPRRVL 240 CGFEFVYGDH HNQIMGTSNS HGYEMGPLIS SCPSNYEAML QDLSTTTQEY DTHLKILDSN 300 AV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	1e-82	MYB family protein