PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023002390.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 376aa    MW: 41349.9 Da    PI: 6.0486
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023002390.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.95.7e-18263297135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  XP_023002390.1 263 CMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 297
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MEAPEYFHNN AYCSQFTSDK DAAASTATAT ATADHFIVEE LLDFSNDDDS AIADSGGFFN  60
NVTCFLNGNS SESSAATAVE SSNSSSFSGC ERTSFFDDVS GSSLADVRFS DDIFIPYNEL  120
VELEWLASFE EEPFSSEDMQ KLELITGVKV KPDEPLQSQH PTTAVSAASH GRNAAAEIFK  180
PDIVAVPAKA RSKRSRIIPS NWNNSRLLPL SPTSSSSEQD IPATEPPPHP VKKVPPKVAA  240
AVKKKESSSS SETGMSAGEG RKCMHCATDK TPQWRTGPMG PKTLCNACGV RYKSGRLVPE  300
YRPAASPTFV LTKHSNSHRK VLELRRQKEL QKAQEQQALM MDHHHHHHHQ EMMFDSSNGE  360
DYLMKQNVAH DYLHLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.12e-62GATA family protein