PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023002385.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 378aa MW: 41769 Da PI: 8.9077 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 175.9 | 1.1e-54 | 44 | 171 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deel+++yL +k+++ +++ +++++vd++k+ePw+Lp k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++++ XP_023002385.1 44 LPPGFRFHPSDEELITYYLLNKISDANFTG-RAVTDVDLNKFEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNT 137 79*************************999.88***************99999****************************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++elvg+kktLvfykgrap+gekt+Wvmheyrl XP_023002385.1 138 dTSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRL 171 77888***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 378 aa Download sequence |
MQVSSGDNLG TEKDGKRSEV MKKNTVAESD RNHQDHAQEQ DQTLPPGFRF HPSDEELITY 60 YLLNKISDAN FTGRAVTDVD LNKFEPWELP GKAKMGEKEW YFFSLRDRKY PTGVRTNRAT 120 NTGYWKTTGK DKEIFNTDTS ELVGMKKTLV FYKGRAPRGE KTNWVMHEYR LHSKTAFRTA 180 KDEWVVCRVF QKSAGPKKYP PNQTRAVNPY VNLEIAPPLL PPPLMQLGDP AAQYGYGRNY 240 ITGADLAELN RVLRAGGGGS GSGGSTHGIN LSMQPQFNYQ PAGGCFTISG LNLNLGGASS 300 QPVLRPMPPP VAAPMKIGQQ DIGSSVMAAT MANSSVIASA IGPETAYGAE ISNNGNGPGN 360 RFMNMDHCMD LENYWQNW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 1e-108 | NAC family protein |