PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023002015.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 230aa MW: 25620.5 Da PI: 9.2032 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.4 | 7.7e-19 | 37 | 82 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l+++v ++G+++W++I+r++ gR++k+c++rw + XP_023002015.1 37 KGPWSAEEDRILIHLVDRYGPRNWSLISRYIK-GRSGKSCRLRWCNQ 82 79*****************************9.***********985 PP | |||||||
2 | Myb_DNA-binding | 53 | 8e-17 | 91 | 133 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ede ++ a++++G++ W+tIar ++ gRt++ +k++w++ XP_023002015.1 91 PFSATEDETILAAHARFGNR-WATIARLLP-GRTDNAVKNHWNST 133 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MTTASSSSSS SSSSSSSSTS SGTSFSAKPS RRPEKIKGPW SAEEDRILIH LVDRYGPRNW 60 SLISRYIKGR SGKSCRLRWC NQLSPNVEHR PFSATEDETI LAAHARFGNR WATIARLLPG 120 RTDNAVKNHW NSTLKRRARD QQHHLAMDGI TPDNHGNAVT DSDLKLSVPL EDDPLTALTL 180 APPGISGGVV AEERRIESFP AGFWDAMRDV VAREVREYMT TTFLENQEFH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 2e-60 | MYB family protein |