PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023001876.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 222aa    MW: 24655.9 Da    PI: 5.1834
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023001876.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF84.18.6e-27554251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    +i+n + rqvtfskRr g++KKAeELSvLCdaeva+++fs tgkl+++ss
  XP_023001876.1  5 KINNLTARQVTFSKRRRGLFKKAEELSVLCDAEVALLVFSATGKLFDFSS 54
                    799*********************************************96 PP
2K-box51.15.7e-18841651798
           K-box  17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                      +  +a+L ke+  + +++R++ GedL+ L+l++L+qLe  Le +l ++ ++K++ ++++i+ l  k  +l een++L++++
  XP_023001876.1  84 ENSSHARLTKEVADMSHQLRQMRGEDLQGLNLEDLKQLEGVLEIGLARVLQTKERKIMNEINALELKGARLMEENRTLNRQM 165
                     566789************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MAREKINNLT ARQVTFSKRR RGLFKKAEEL SVLCDAEVAL LVFSATGKLF DFSSSSVNDV  60
IARYNLHSSN LGELEDPSLD LQLENSSHAR LTKEVADMSH QLRQMRGEDL QGLNLEDLKQ  120
LEGVLEIGLA RVLQTKERKI MNEINALELK GARLMEENRT LNRQMIRLSN QRRPLLVVSD  180
VPVPEDGVSS DSAANMYSCN SGPPADDDSS DTSLKLGLAC PN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.17e-85MIKC_MADS family protein