PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023001347.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 312aa MW: 34723.9 Da PI: 7.3817 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.7 | 2.4e-17 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd lv +++q+G+g+W++++ g+ R+ k+c++rw +yl XP_023001347.1 15 KGPWTPEEDISLVSYIQQHGPGNWRSVPTNTGLLRCSKSCRLRWTNYL 62 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.1 | 1.3e-15 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T Ed+ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l XP_023001347.1 68 RGNFTDHEDKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 113 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MMGRPPCCEK VGVKKGPWTP EEDISLVSYI QQHGPGNWRS VPTNTGLLRC SKSCRLRWTN 60 YLRPGIKRGN FTDHEDKMII HLQALLGNRW AAIASYLPQR TDNDIKNYWN THLKKKLKRV 120 QSGTDGGAQD RFTPSQTSTL CKGQWERRLQ TDIHTAKRAL CEALSLDKQN PFGIIEDSKP 180 QTDNPILQSP PPPPPPTTTT SPYASSAENI ARLLENWMKK SPEKSSEITT QACVSEGSQS 240 ATNCNNSPDG PTLDDSSCFL NFNNTSSTST ANQEVPLTFL EKWLFDDAAL ANVHADQDFV 300 SVSLEAQTEG LF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47600.1 | 1e-106 | MYB family protein |