PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023001194.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 245aa MW: 28245.2 Da PI: 9.5324 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93 | 1.4e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+n qvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+ XP_023001194.1 9 KRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 109.5 | 3.7e-36 | 78 | 174 | 4 | 100 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ ++++++ + +++ e+akLk++ie Lq+++Rh++GedLesLslkeLq++eqqL+++lk++R++Kn+l++e+i++lqkk k+lq++n++L kk+ XP_023001194.1 78 RRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESLSLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNMLAKKI 172 556667888999**********************************************************************************9 PP K-box 99 ee 100 e XP_023001194.1 173 RE 174 76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MGRGRVQLKR IENKINMQVT FSKRRSGLLK KAHEISVLCD AEVALIVFST KGKLFEYSTD 60 SCMEKILERY ERYSYAERRL VANDSQSNGN WTLEYAKLKA RIEVLQKNHR HFMGEDLESL 120 SLKELQNIEQ QLDSALKHVR ARKNQLMHES ISDLQKKDKA LQDQNNMLAK KIREKEKAQA 180 QNPQMEQQHS HAIEPSPLLL PQPFQSLNMP CPYPTHATGH EESAANHDRS GTLLPPWMLG 240 HHLGN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 1e-92 | MIKC_MADS family protein |