PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023001170.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 202aa MW: 23129.6 Da PI: 10.8656

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023001170.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	89.1	2.3e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLCdaeva++ifs++gk y +ss XP_023001170.1 9 KRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSS 59 79***********************************************96 PP
2	K-box	68.1	2.9e-23	85	169	14	98
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 a ++ e++ +k+ i +L +R++ GedL++LslkeL+qLe+q+ +++++RskK ++ e++++l++k k lqee+ +L+k+l XP_023001170.1 85 ALLWKSEMEDMKRSIISLDARLRNFAGEDLGPLSLKELKQLERQMSIGIERVRSKKRRITSEHVNQLKRKYKGLQEEHSRLQKRL 169 55699*****************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MGRGKVQLKR IENPTSRQVT FSKRRNGLLK KAYELSVLCD AEVALLIFSP SGKAYQFSSH 60 DMDGTLARYR SDVGLPQSNH PHSRALLWKS EMEDMKRSII SLDARLRNFA GEDLGPLSLK 120 ELKQLERQMS IGIERVRSKK RRITSEHVNQ LKRKYKGLQE EHSRLQKRLN QLKDVAVTTS 180 RISDANAFSA FEMAFQVNGL QN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	6e-49	MIKC_MADS family protein