PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023001090.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 483aa MW: 53490.1 Da PI: 8.9817

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023001090.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.8	4.5e-17	60	104	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a k++G g W+ I +++g ++t+ q++s+ qk+ XP_023001090.1 60 REKWTEEEHQRFLEALKLYGRG-WRQIKEHVG-TKTAVQIRSHAQKF 104 789*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MGVQEKNEGT LSNGSIAAAN NCLPKDGAQL DPLMRVSSIS SNSNENALKV RKPYTISKQR 60 EKWTEEEHQR FLEALKLYGR GWRQIKEHVG TKTAVQIRSH AQKFFSKVVR ESSGSNESSI 120 NPIEIPPPRP KRKPVHPYPR KAVDSIKAIS VAREPKRSLS PNLSAAEKET QSPTSVLTAF 180 SSDDQISAVS EQHNRCPSPI SQTVDMQSAR ISYVRKGELY LPSKSNGGEE KGMLSLESSS 240 ERFSEDSLTM KFKRGSACKK VDNKLHFPVR SIKLFGRTVM VTGDKQPPGH DFEVTKSLAF 300 DSDSKNTCEA YAEKTIQILP SKHMDVNLSL GMDNNGDWNM SPGGAPTNTL GNQDKSVPYV 360 KAMPNAPQTC WSLYQNVPFF YLAQSDQTST GTCTDHVMEE RIQNDNFLES SCADSCSGSP 420 SKNENKNQSP EVKCQEPCLV GRGNANESKK GFVPYKRCLA QRDTSSALIV SEEREGRRAR 480 VCL

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MGVQEKNEGT LSNGSIAAAN NCLPKDGAQL DPLMRVSSIS SNSNENALKV RKPYTISKQR  60
EKWTEEEHQR FLEALKLYGR GWRQIKEHVG TKTAVQIRSH AQKFFSKVVR ESSGSNESSI  120
NPIEIPPPRP KRKPVHPYPR KAVDSIKAIS VAREPKRSLS PNLSAAEKET QSPTSVLTAF  180
SSDDQISAVS EQHNRCPSPI SQTVDMQSAR ISYVRKGELY LPSKSNGGEE KGMLSLESSS  240
ERFSEDSLTM KFKRGSACKK VDNKLHFPVR SIKLFGRTVM VTGDKQPPGH DFEVTKSLAF  300
DSDSKNTCEA YAEKTIQILP SKHMDVNLSL GMDNNGDWNM SPGGAPTNTL GNQDKSVPYV  360
KAMPNAPQTC WSLYQNVPFF YLAQSDQTST GTCTDHVMEE RIQNDNFLES SCADSCSGSP  420
SKNENKNQSP EVKCQEPCLV GRGNANESKK GFVPYKRCLA QRDTSSALIV SEEREGRRAR  480
VCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	9e-49	MYB_related family protein