PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023001003.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 238aa MW: 27133.4 Da PI: 10.0577

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023001003.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.9	1e-17	4	49	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed++l ++v+++G+++W++Ia++++ gR++k+c++rw++ XP_023001003.1 4 RGHWRPAEDDKLRELVERYGPHNWNAIAQKLQ-GRSGKSCRLRWFNQ 49 899***************************.*********996 PP
2	Myb_DNA-binding	52.4	1.2e-16	56	99	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l ++ +G++ W+ Iar ++ gRt++ +k++w+ XP_023001003.1 56 RSPFTEEEEERLMASHRVHGNR-WAIIARLFP-GRTDNAVKNHWHV 99 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MCSRGHWRPA EDDKLRELVE RYGPHNWNAI AQKLQGRSGK SCRLRWFNQL DPRINRSPFT 60 EEEEERLMAS HRVHGNRWAI IARLFPGRTD NAVKNHWHVI MARKSRDSSK AKAKAKAKAK 120 AITKTQTLSP SSQSHLLLSS FLQTSCPPNN ASLFLNHSLY PNPISSFIPK PTDRSVEFYD 180 FLHLNAESIN ASEVIDNSRK EDYEEVNQEA TATAARPLFP FIDFFSAQTS NSVSSSHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	7e-79	MYB family protein