PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023000911.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 334aa MW: 37228.9 Da PI: 4.3683

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023000911.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.4	2.8e-19	106	159	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++++q++ Le+ Fe ++++ e++ +LAk lgL+ rqV +WFqNrRa++k XP_023000911.1 106 KKRRLSADQVRFLEKSFETENKLEPERKVQLAKDLGLQPRQVAIWFQNRRARWK 159 56689************************************************9 PP
2	HD-ZIP_I/II	130.8	5.3e-42	105	195	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrls++qv++LE+sFe+e+kLeperKv+la++Lglqprqva+WFqnrRAR+ktkqlEkdyeaL+++y +lk + e+L ke+++L++e+ XP_023000911.1 105 EKKRRLSADQVRFLEKSFETENKLEPERKVQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYEALQSSYGNLKVDYENLLKEKDSLKAEI 195 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MAGRRVYGGG GDDGGSISGV SSNHSVLLQN RGGSFASEPL SALFLSGSSS STSPSLLDCS 60 GIGSRSMMSF EDIRGGNGSN RSFFCPFDNE DNGDEDLDDY FHHPEKKRRL SADQVRFLEK 120 SFETENKLEP ERKVQLAKDL GLQPRQVAIW FQNRRARWKT KQLEKDYEAL QSSYGNLKVD 180 YENLLKEKDS LKAEILVLTD KLILKDKERS NSVVSEDDKF GEEPPQNLVD EASKSSKLGC 240 KQEEMSSVKS DIFDSDSPHY TDGVHSSLLD PGDSSYIFDP DQSDLSQDEE DNLGKNLLPP 300 CIFPKLEDVD YSDPPTSSCN FVFPIDDNAL WSWS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	154	162	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	2e-46	HD-ZIP family protein