PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023000798.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 555aa    MW: 62584.7 Da    PI: 6.5612
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023000798.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.39.2e-16411191297
                     HTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3  12 ksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     ++  + +p  fa++  +++   +k+++led+ g++W+v++  +++ g+  +++GW+ F +++ L+ gDfv+F ++   + +++v+++
  XP_023000798.1  41 SE-VVFFPPIFASTVsKLV---NKKVVLEDSLGQQWKVTV--SNCEGSLAFQEGWSAFSSEHSLEIGDFVIFNHIM--DLHFNVSIY 119
                     43.3778999998885444...568***************..*******************************775..454577776 PP
2B341.32.7e-134705511797
                     E--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3  17 vlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                      lp +f   +     ++e++k + l+d+s r W + +     ++  vlt+GW+ F+ an++++gD ++F+++++ ++e++++++
  XP_023000798.1 470 ELPMTFHLPCsrgRRNPENKKVVFLRDPSKRLWPILY--HEMPNVQVLTSGWEAFCCANRIESGDECLFHVKDELKREYNISIR 551
                     56666633334446667788899**************..9******************************98888888998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 555 aa     Download sequence    
MSSKVEACPE CTQRCLRFHR KTGNSSSVTS FFKVMFGDRF SEVVFFPPIF ASTVSKLVNK  60
KVVLEDSLGQ QWKVTVSNCE GSLAFQEGWS AFSSEHSLEI GDFVIFNHIM DLHFNVSIYT  120
KTGCEKVWFA EKSYTRKRIR STCPVLEITN EGLSNPQASS PSVGSGSNVT LSQDKFHVAG  180
YRNMNVYQGK RRKYQSNDEW HGPLNIVDDS YCLIDRNKDV GPEENRSPLF NLFSMEMQMV  240
NSCINENSTN KAAQDEINPN CASSSQNTII SVGPVNSVPV DIRGDTEVLP SNVSANKIND  300
KRQCFEEADI KMSVSGKDPC HDRTIEVPFI SSATNSDQKG EPFCDMPLKI IRDYQNVPAM  360
CNTVSTITRH DQGSSVKQEY PPNSLKVKKC LHGDEKKIIK MEPLEIKTEV NNCGDITEQI  420
LEPKVIKEEF LETSNQSGRE NNDTTDNADP IGTPAHISCV VAKDTLSFLE LPMTFHLPCS  480
RGRRNPENKK VVFLRDPSKR LWPILYHEMP NVQVLTSGWE AFCCANRIES GDECLFHVKD  540
ELKREYNISI RKCKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.15e-13B3 family protein