PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023000542.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 251aa MW: 28395.7 Da PI: 8.352 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.1 | 1.6e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l + v+ +G +W++ ++ g+ R++k+c++rw +yl XP_023000542.1 14 RGPWSPEEDRILTNFVQDHGHTNWRALPKQAGLLRCGKSCRLRWTNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 52.6 | 1.1e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l XP_023000542.1 67 RGNFTKEEEDAIINLHELLGNR-WSAIAAKLP-GRTDNEIKNLWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MGRAPCCEKM GLKRGPWSPE EDRILTNFVQ DHGHTNWRAL PKQAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF TKEEEDAIIN LHELLGNRWS AIAAKLPGRT DNEIKNLWHT HLKKRLQKPI 120 KTTPPKSKNK TKKQTKSNSS SNYSSSMAIT NQTHLPICSS SMSPSQQSST SEICSSLTTD 180 ASMAENEYYS YTADDTAAPL LIDESFWSDA AENYNPNSDS SSSYYNEENK DMEFWYNVFV 240 KAGGIPGLPE F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 4e-78 | MYB family protein |