PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023000050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 301aa MW: 34317.3 Da PI: 8.9015 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.9 | 6.4e-15 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+ Ed +l+++++ G g+W++ ++ g+ R++k+c++rw +yl XP_023000050.1 16 RGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINYL 63 8*******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 51.4 | 2.4e-16 | 69 | 112 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++Ede ++++++ +G++ W++Ia +++ gRt++++k++w++ XP_023000050.1 69 RGNITQQEDETILKLHRTFGNR-WSLIAGHLP-GRTDNEIKNYWNS 112 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MRMGRTPCCE KEGLRRGRWT AVEDNKLKKY IEANGEGSWR LLPKNAGLLR CGKSCRLRWI 60 NYLRADLKRG NITQQEDETI LKLHRTFGNR WSLIAGHLPG RTDNEIKNYW NSRLSKKIYS 120 TTTKKDAPES ADLSKRSNRG QPKKSAILKK NKKQTTPLES SQSNSIAKEA LLDAGSTSRL 180 EGAEKEPSKS DKEEKKETSN AAMKDPKVEE KETWELGSNE LIDETIKGID ERENSVWSSN 240 IESEELYYSS SAWASSINSN FNSEWLNWNW EDDGGVLGQN FKEPSSWVFW ANTNGKGEEC 300 L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49330.1 | 4e-65 | MYB family protein |