PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022999842.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 224aa MW: 25607.3 Da PI: 6.3816 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.6 | 9.1e-30 | 11 | 58 | 3 | 50 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 ien + rqvtfskRrng++KKA+ELSvLCdaeva+iifs++gklye++ XP_022999842.1 11 IENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFA 58 9**********************************************8 PP | |||||||
2 | K-box | 78.6 | 1.6e-26 | 83 | 175 | 8 | 99 |
K-box 8 sleeakaeslqqel.akLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 s+++ + e+l++e+ a L k+ie+L+ ++R++lGedL+s+s+ eLq++e+qLeks+ kiR++K e++ eqi++l++ke+ l+ en +L +k+e XP_022999842.1 83 SVSDIQLEHLNHEAaATLMKKIEQLEVSKRKMLGEDLGSCSIDELQEVEHQLEKSVCKIRARKVEVFEEQIKQLKHKENLLEAENAKLLEKWE 175 57788888988886268************************************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MVRGKTQMRL IENATSRQVT FSKRRNGLMK KAFELSVLCD AEVALIIFSP RGKLYEFANS 60 SMQATLERYR KHAKTKEALE PPSVSDIQLE HLNHEAAATL MKKIEQLEVS KRKMLGEDLG 120 SCSIDELQEV EHQLEKSVCK IRARKVEVFE EQIKQLKHKE NLLEAENAKL LEKWESEAEG 180 GVKEVERGEN LMNYTESSSP SSEVETELFI GPPETRPRTF LSLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 6e-75 | MIKC_MADS family protein |