PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022999761.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 225aa MW: 25842.8 Da PI: 4.2236 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60 | 3.7e-19 | 43 | 96 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q++ Le+ Fe ++++ e++++LAk+lgL+ rqV +WFqNrRa+ k XP_022999761.1 43 KKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCK 96 566899**********************************************99 PP | |||||||
2 | HD-ZIP_I/II | 127.3 | 6.8e-41 | 43 | 134 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrls +qv++LE+sFe e+kLeperK++la+eLglqprqva+WFqnrRAR ktkqlEkdy +Lk++yd+lk++ e L +e+eeL++e+++ XP_022999761.1 43 KKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYEDLVREKEELETEIRN 134 9**************************************************************************************99976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MADGAVYAPP SSDVLDSLII PGEFIGETNE DELLDGLWRK ASKKRRLSVD QVQFLEKSFE 60 VENKLEPERK TQLAKELGLQ PRQVAIWFQN RRARCKTKQL EKDYLSLKTS YDNLKSSYED 120 LVREKEELET EIRNLEERLA NGEKGNRIDC CWENQNSSMA DSSHGFETEL SDCFSQVEEE 180 NLSGDLLPIC FPKLESCYYD DDLTDGCCNL VGFQIEDQAL GFWPC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 91 | 99 | RRARCKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 9e-36 | HD-ZIP family protein |