PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022998892.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 266aa MW: 29907.6 Da PI: 8.3329

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022998892.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.1	1.5e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++ +G+g +W + +++ g++R++k+c++rw++yl XP_022998892.1 14 KGPWSPEEDAKLKAYIHNHGTGgNWISLPQKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	41.3	3.6e-13	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd ++ ++ G++ W+ Ia ++ gRt++++k++w++ XP_022998892.1 69 GGFTEEEDRIICTLFSTIGSR-WSIIATQLP-GRTDNDIKNHWNS 111 569****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MGRSPCCDKA NVKKGPWSPE EDAKLKAYIH NHGTGGNWIS LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGG FTEEEDRIIC TLFSTIGSRW SIIATQLPGR TDNDIKNHWN SKLKKKLIGM 120 EKHPQIIPTT MPYSSHHNDH QVSSFPAQPL SSIPSNWSND NDNISPCLVP TQESNMNSLL 180 SSLMYQHNQT LDGRSCTQIN NTSRIMMMGF QNQPHNYNYY YDAMNDEEHN NICFNGGGGG 240 GGGGGDDHVH STTSLFQCME GKFMKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	4e-76	MYB family protein