PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022998763.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 250aa    MW: 28774.8 Da    PI: 8.3201
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022998763.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.59.8e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+ rqvtfskRr+g+lKKA+E+SvLCda+va+i+fs++gkl+eys+
  XP_022998763.1  9 KRIENKISRQVTFSKRRAGLLKKAHEISVLCDADVALIVFSTKGKLFEYST 59
                    79***********************************************96 PP
2K-box94.91.3e-318817513100
           K-box  13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                      + s+++e+ k+ +++e +q+++R++lGe+Le+L+l+eLq+LeqqL++slk+iR++Kn+l+ e+i+ l kke+elqeen++L +k++e
  XP_022998763.1  88 LQVSWCEEYPKIAARMEIIQNNIRRYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKVKE 175
                     4568*********************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MGRGRVQLKR IENKISRQVT FSKRRAGLLK KAHEISVLCD ADVALIVFST KGKLFEYSTH  60
ASMEKILEKY ERCSYAERPL ATNADSDLQV SWCEEYPKIA ARMEIIQNNI RRYLGEELEP  120
LNLRELQSLE QQLDSSLKRI RARKNQLMQE SISLLHKKER ELQEENRQLA NKVKENEKAL  180
VERGHCELPN LAPYQPILAM PPPIPSLFIG ENLHDGRGST GSDEDETRPT STNIQIPAWM  240
LSNVTENHRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26310.17e-70MIKC_MADS family protein