PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022998743.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 276aa    MW: 31306.1 Da    PI: 8.9272
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022998743.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.91.6e-151562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++++G+ +W+ ++   g+ R+ k+c++rw +yl
   XP_022998743.1 15 KGPWTPEEDIILVSYIQEHGPSNWRWVPTNTGLLRCSKSCRLRWTNYL 62
                     79******************************99************97 PP
2Myb_DNA-binding49.31.1e-1568113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T  E++ +v++ ++lG++ W++Ia++++  Rt++++k++w+++l
   XP_022998743.1  68 RGNFTDHEEKMIVHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 113
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MMGRHPCCDK VGVKKGPWTP EEDIILVSYI QEHGPSNWRW VPTNTGLLRC SKSCRLRWTN  60
YLRPGIKRGN FTDHEEKMIV HLQALLGNRW AAIASYLPQR TDNDIKNYWN THLKKKLKKL  120
HSGSDGGQSR ISKGQWERRL QTDIHTAKRA LCEALSLHKP SSYETMEESK PQQSTATYAS  180
SAENIAKLLE NWMKKSPKSS TQSEGSQSGT NYNNSPEVNL DDSLFNFNDN NNSPSTSTTN  240
QVPPLSFLEK WLFDDGALAH VHADHIISVS LEAETR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.17e-94MYB family protein