PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022998567.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 548aa MW: 59950.6 Da PI: 7.2323

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022998567.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.9	2e-33	204	261	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g Hnh+k XP_022998567.1 204 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL-DGQITEIVYKGGHNHPK 261 8**************************************.*************85 PP
2	WRKY	106	1.9e-33	373	431	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++d ++v++tYeg+Hnhe XP_022998567.1 373 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHNHE 431 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 548 aa Download sequence
MASSSGSLDT SANSHPSFTF STHPFMTTSY SDLLAAGSND LPSSAAAHGA HRGTGTGVPK 60 FKSLPPPSLP LSPPTLFPSP LFSIPPGLSP TELLDSPVFL SGSYVLPSPT TGSFPSQSLN 120 WKNNSGCNQQ SIKEENKFLS EFSFLNQSSQ PPTSFQPAPT TQGKKQDGSM QSFSPEYGIV 180 QNQSQNNAGR DYPQQSQTVN RRSDDGYNWR KYGQKQVKGS ENPRSYYKCT FPNCPTKKKV 240 ERSLDGQITE IVYKGGHNHP KPQSTRKSSL SSAVSASNPA ANDMAEQSFT TQGSGQVDGV 300 ATPENSLISV GDDDFDRSSQ RSKSAGDDND EDEPEAKRWR RDGDNSEGIS AAGNRTVREP 360 RVVVQTTSDI DILDDGYRWR KYGQKVVKGN PNPRSYYKCT NPGCPVRKHV ERASHDLRAV 420 ITTYEGKHNH EVPPARGSGS HSLSRPFPSN DPSATAIRPL AVTHQANNGA DNNDDNLLHG 480 MRLQQSSDNQ TPFTLEMVQT PNGFSFPEFW NSIGMGSYMN PTQSNDNTFI RAKEEPRDHD 540 MFIQSHLC

Sequence ? help Back to Top

Protein Sequence Length: 548 aa Download sequence

MASSSGSLDT SANSHPSFTF STHPFMTTSY SDLLAAGSND LPSSAAAHGA HRGTGTGVPK  60
FKSLPPPSLP LSPPTLFPSP LFSIPPGLSP TELLDSPVFL SGSYVLPSPT TGSFPSQSLN  120
WKNNSGCNQQ SIKEENKFLS EFSFLNQSSQ PPTSFQPAPT TQGKKQDGSM QSFSPEYGIV  180
QNQSQNNAGR DYPQQSQTVN RRSDDGYNWR KYGQKQVKGS ENPRSYYKCT FPNCPTKKKV  240
ERSLDGQITE IVYKGGHNHP KPQSTRKSSL SSAVSASNPA ANDMAEQSFT TQGSGQVDGV  300
ATPENSLISV GDDDFDRSSQ RSKSAGDDND EDEPEAKRWR RDGDNSEGIS AAGNRTVREP  360
RVVVQTTSDI DILDDGYRWR KYGQKVVKGN PNPRSYYKCT NPGCPVRKHV ERASHDLRAV  420
ITTYEGKHNH EVPPARGSGS HSLSRPFPSN DPSATAIRPL AVTHQANNGA DNNDDNLLHG  480
MRLQQSSDNQ TPFTLEMVQT PNGFSFPEFW NSIGMGSYMN PTQSNDNTFI RAKEEPRDHD  540
MFIQSHLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-107	WRKY family protein