PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022998511.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 230aa MW: 26396.5 Da PI: 6.1289

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022998511.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.1	4.9e-19	6	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll +v +G g+W+++ar g++Rt+k+c++rw++yl XP_022998511.1 6 KGPWTPEEDSLLFSYVSIHGEGHWNSVARSTGLKRTGKSCRLRWLNYL 53 79********************************************97 PP
2	Myb_DNA-binding	47.3	4.7e-15	59	102	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l+++++ ++G++ W++Ia+ ++ gRt++++k++w++ XP_022998511.1 59 RGNITLQEQLLILQLHSRWGNR-WSKIAQFLP-GRTDNEIKNYWRT 102 7899****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MEDLKKGPWT PEEDSLLFSY VSIHGEGHWN SVARSTGLKR TGKSCRLRWL NYLRPNVRRG 60 NITLQEQLLI LQLHSRWGNR WSKIAQFLPG RTDNEIKNYW RTRVQKQAKQ LNCDVNSQRF 120 RDAMRHVWIP RMVERITATS SPLPSLPPPC IDISTSTSTV FETTWANPND NNIPANVSAS 180 SSDVSDLTVV DGSGWDEGFG SEWWEGDGVD SLESLWTEEN ICFLQQQLFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47190.1	8e-71	MYB family protein