PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022998393.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 912aa MW: 101045 Da PI: 5.7382

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022998393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.1	7.7e-33	746	803	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt a+C+vkk+vers dp+vv++tYeg+H+h+ XP_022998393.1 746 EDGYRWRKYGQKAVKNSPFPRSYYRCTNASCNVKKRVERSFVDPTVVVTTYEGQHTHP 803 8********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 912 aa Download sequence
MSKRKFGFEG FGINRQTTYN FERSQAPQRL YVPPSSRGHG HDNYEDTDVD NIEYDDNEAE 60 EASGNGDNVA GAGGGEEEEI DPLDAFMEGI HEEMKAPPPP KPKEKVDKYR DDEEDDPMES 120 FLKAKKDVGL TLAADALHAG YDSDEEVYAA AKAVDAAMVE YDSDDNMLIV EKKKIESIPA 180 LEHSSIDYEP FNKDFYEEKA SISGMSEEEV SEYRKNLAIR VSGFDVPRPI KTFEDSGFSL 240 QLMNAIKKQG YEKPTSIQCQ AMPIVLSGRD IIGIAKTGSG KTASFVLPMI VHIMDQPELE 300 KEEGPIGVIC APTRELAHQI YLECKKFSKV HGLRVSAVYG GMSKFDQIKE LKAGCEIVVA 360 TPGRLIDMIK MKALTMSKAT YLVLDEADRM FDLGFEPQIR SIVGQIRPDR QTLLFSATMP 420 RKVEKLAREI LTDPVRVTVG EVGMANEDIT QVVHVLPSDL EKLPWLLEKL PEMIDDGDVL 480 VFASKKATVD EIESQLLQKG FKVAALHGDK DQASRMETLQ KFKSGVYHAL IATDVAARGL 540 DIKSIKSVVN FDIAKDMDMH VHRIGRTGRA GDRDGKAHTL ITQKEARFAG ELVNSLIAAG 600 QNVSMELMDL AMKDGRFRSK RDARKKGGGG GGGGYLPFSD STTGSSLFDF CDGEKLSVGF 660 MELLGVKNGE FKDYCSEVVN PPDTPNSSSI SSPSTDAADH EADGENQQQQ QHKPSSNPLK 720 VKRRKQKREK GQRFAFMTKS EVDHLEDGYR WRKYGQKAVK NSPFPRSYYR CTNASCNVKK 780 RVERSFVDPT VVVTTYEGQH THPSPILTRS ALAIATPPRP SVDMLGGGCV DVAPIPWLKA 840 SNDTHAISHQ YIQNSTFFTP QHSTVDYNRS LIGAANMAGF LPENRLRNPN PAFLADHGLL 900 QDVVPPHMLK QE

Sequence ? help Back to Top

Protein Sequence Length: 912 aa Download sequence

MSKRKFGFEG FGINRQTTYN FERSQAPQRL YVPPSSRGHG HDNYEDTDVD NIEYDDNEAE  60
EASGNGDNVA GAGGGEEEEI DPLDAFMEGI HEEMKAPPPP KPKEKVDKYR DDEEDDPMES  120
FLKAKKDVGL TLAADALHAG YDSDEEVYAA AKAVDAAMVE YDSDDNMLIV EKKKIESIPA  180
LEHSSIDYEP FNKDFYEEKA SISGMSEEEV SEYRKNLAIR VSGFDVPRPI KTFEDSGFSL  240
QLMNAIKKQG YEKPTSIQCQ AMPIVLSGRD IIGIAKTGSG KTASFVLPMI VHIMDQPELE  300
KEEGPIGVIC APTRELAHQI YLECKKFSKV HGLRVSAVYG GMSKFDQIKE LKAGCEIVVA  360
TPGRLIDMIK MKALTMSKAT YLVLDEADRM FDLGFEPQIR SIVGQIRPDR QTLLFSATMP  420
RKVEKLAREI LTDPVRVTVG EVGMANEDIT QVVHVLPSDL EKLPWLLEKL PEMIDDGDVL  480
VFASKKATVD EIESQLLQKG FKVAALHGDK DQASRMETLQ KFKSGVYHAL IATDVAARGL  540
DIKSIKSVVN FDIAKDMDMH VHRIGRTGRA GDRDGKAHTL ITQKEARFAG ELVNSLIAAG  600
QNVSMELMDL AMKDGRFRSK RDARKKGGGG GGGGYLPFSD STTGSSLFDF CDGEKLSVGF  660
MELLGVKNGE FKDYCSEVVN PPDTPNSSSI SSPSTDAADH EADGENQQQQ QHKPSSNPLK  720
VKRRKQKREK GQRFAFMTKS EVDHLEDGYR WRKYGQKAVK NSPFPRSYYR CTNASCNVKK  780
RVERSFVDPT VVVTTYEGQH THPSPILTRS ALAIATPPRP SVDMLGGGCV DVAPIPWLKA  840
SNDTHAISHQ YIQNSTFFTP QHSTVDYNRS LIGAANMAGF LPENRLRNPN PAFLADHGLL  900
QDVVPPHMLK QE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	723	730	RRKQKREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47260.1	6e-47	WRKY family protein