PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022998175.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 211aa MW: 24463.4 Da PI: 10.6587 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.7 | 4.1e-11 | 16 | 61 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + +l +v+++ +++W+ Ia+ ++ gR++k+c++rw++ XP_022998175.1 16 RGHWHAAKNHKLQMLVERHDPHNWNVIAQSLQ-GRSGKSCRLRWFNQ 61 56777777789999******************.***********996 PP | |||||||
2 | Myb_DNA-binding | 54.9 | 2e-17 | 68 | 111 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++T+eEd++l+ a++ +G++ W+ I+r ++ Rt + +k++w+ XP_022998175.1 68 RDPFTQEEDQRLLAAHTIHGNR-WAIISRLFP-SRTNNAVKNHWHV 111 789*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MGSHQIWTSM IVTHSRGHWH AAKNHKLQML VERHDPHNWN VIAQSLQGRS GKSCRLRWFN 60 QLDPRINRDP FTQEEDQRLL AAHTIHGNRW AIISRLFPSR TNNAVKNHWH VIRSRMSRRA 120 SKYHVKTMLG ITNIHSDRNQ GVDFYNFLHL NTRSINGSEV IDHSRKDDEE VNQKAATTAN 180 TGHDVVVQGT HKDEEKVVPF IDFFAAQTSI S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 1e-57 | MYB family protein |