PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022998133.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 668aa MW: 76716.8 Da PI: 5.3744

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022998133.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.2	2.1e-21	60	142	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+ YAke GF vr+s++ ++ +++e ++ ++ Cs g++++++ + r+r+etrtgC a++k +++++ +w+++++el+HnH ++ XP_022998133.1 60 FYSCYAKEQGFGVRVSNTWYR-KSKERYRGKLSCSSAGFKKKSEAN-----RPRPETRTGCPAMIKFRLMDTRRWRIIEVELDHNHLIN 142 9*************99997.66779**********99888.....*********************************775 PP

Sequence ? help Back to Top
Protein Sequence Length: 668 aa Download sequence
MDGVSLNTDP VGDEEADYFE IEGDSVLADY VDQTGMFQGE NPLPPAVGME FESYEDVYYF 60 YSCYAKEQGF GVRVSNTWYR KSKERYRGKL SCSSAGFKKK SEANRPRPET RTGCPAMIKF 120 RLMDTRRWRI IEVELDHNHL INPTSGKFYK SHKNLGVGTK RLLQLDSAEE VQKVRLFRTV 180 VVDADHNEFL DVDEGEFGNS VDDSNQLKFN EGDAVAVEDF LCQAQLTDSN FFYVVDFNEK 240 GSLMNLFWVS SRSKAAYNYF GDVVYIDTSC LANKYEVPLV SIIGINHHGQ SVLFGCGLLA 300 MEAAESYIWL FRAWLTSILG RPPQVIIADQ CVALQIALAD VFPRASHCIS LSDIMRKVPQ 360 KLGSLLEYKE IETEICKAVY HSSKPEQFEA VWEGMIQQHM LGDHKWLQAI YEDRRRWVPV 420 FVKDVFLAGV MSIQSSDTVS CFFQEYLGVH TSLREFLEKY DRALQSHYQL EALADADSKS 480 SSFMLRSSCY FELQISKLYT NEILKKFERE VEGMYSSFST RKLNAEGSLV RYIVKEHVEM 540 EGSRRDARDF EVLYNESEME VQCNCGLFNS KGYLCRHTLS VLNQNGIEEI PPQYILPRWR 600 KDVKRSYVLN YSCSGIDINS QIHRYDNLYR SIVQVIEEGR KSKEQYNIAI QGINDILSKL 660 RLGTNPSS

Sequence ? help Back to Top

Protein Sequence Length: 668 aa Download sequence

MDGVSLNTDP VGDEEADYFE IEGDSVLADY VDQTGMFQGE NPLPPAVGME FESYEDVYYF  60
YSCYAKEQGF GVRVSNTWYR KSKERYRGKL SCSSAGFKKK SEANRPRPET RTGCPAMIKF  120
RLMDTRRWRI IEVELDHNHL INPTSGKFYK SHKNLGVGTK RLLQLDSAEE VQKVRLFRTV  180
VVDADHNEFL DVDEGEFGNS VDDSNQLKFN EGDAVAVEDF LCQAQLTDSN FFYVVDFNEK  240
GSLMNLFWVS SRSKAAYNYF GDVVYIDTSC LANKYEVPLV SIIGINHHGQ SVLFGCGLLA  300
MEAAESYIWL FRAWLTSILG RPPQVIIADQ CVALQIALAD VFPRASHCIS LSDIMRKVPQ  360
KLGSLLEYKE IETEICKAVY HSSKPEQFEA VWEGMIQQHM LGDHKWLQAI YEDRRRWVPV  420
FVKDVFLAGV MSIQSSDTVS CFFQEYLGVH TSLREFLEKY DRALQSHYQL EALADADSKS  480
SSFMLRSSCY FELQISKLYT NEILKKFERE VEGMYSSFST RKLNAEGSLV RYIVKEHVEM  540
EGSRRDARDF EVLYNESEME VQCNCGLFNS KGYLCRHTLS VLNQNGIEEI PPQYILPRWR  600
KDVKRSYVLN YSCSGIDINS QIHRYDNLYR SIVQVIEEGR KSKEQYNIAI QGINDILSKL  660
RLGTNPSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein