PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022997895.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 452aa MW: 50697.1 Da PI: 8.6248

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022997895.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	127.1	7.1e-40	151	227	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC++d+s++k+y+r+h+vCe hsk+p+v++ g e+rfCqqCsrfh++sefD +krsCrrrL++hn+rrrk+q+ XP_022997895.1 151 CQVEGCNMDISNVKDYYRKHRVCESHSKSPKVIIGGFERRFCQQCSRFHSISEFDGKKRSCRRRLSNHNARRRKPQS 227 **************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MRRFPQPFVI DGVECKTPFT MGLGQLNSGD DRTTGGPFFK LGQTSPKISK SVSTNSSFFE 60 KSRTTKFTLE GFEPTLEDSC NKKEFVEAEV VSTYGTPETS TCSCEPMLSL KLGKQAYFEN 120 ASAVNLTKPS ALMVESRATR KRCQNTPSAH CQVEGCNMDI SNVKDYYRKH RVCESHSKSP 180 KVIIGGFERR FCQQCSRFHS ISEFDGKKRS CRRRLSNHNA RRRKPQSKVV GLNPARLSSW 240 DFENRQIDIF SDKLSLIYPT PNEKSAWESA FSSRHPQCGK YVSKPEPTYG SIGQLNVSED 300 EMCYVHAMPY HDNTSKAVPF KGAATKILDP EGYVIPSNLN SAQDLQRALS LLSTDTKGPY 360 EARLFAPDNP NRLVNPNYAN QPSISQSPMN LGIQTLPFAS VDSQSWGNGH HHPIELQMQI 420 HHPNIEGGNN LFQDFQLFKT PCEIGMFSNQ IS

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MRRFPQPFVI DGVECKTPFT MGLGQLNSGD DRTTGGPFFK LGQTSPKISK SVSTNSSFFE  60
KSRTTKFTLE GFEPTLEDSC NKKEFVEAEV VSTYGTPETS TCSCEPMLSL KLGKQAYFEN  120
ASAVNLTKPS ALMVESRATR KRCQNTPSAH CQVEGCNMDI SNVKDYYRKH RVCESHSKSP  180
KVIIGGFERR FCQQCSRFHS ISEFDGKKRS CRRRLSNHNA RRRKPQSKVV GLNPARLSSW  240
DFENRQIDIF SDKLSLIYPT PNEKSAWESA FSSRHPQCGK YVSKPEPTYG SIGQLNVSED  300
EMCYVHAMPY HDNTSKAVPF KGAATKILDP EGYVIPSNLN SAQDLQRALS LLSTDTKGPY  360
EARLFAPDNP NRLVNPNYAN QPSISQSPMN LGIQTLPFAS VDSQSWGNGH HHPIELQMQI  420
HHPNIEGGNN LFQDFQLFKT PCEIGMFSNQ IS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	207	224	KKRSCRRRLSNHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	2e-44	SBP family protein